Omics datasets

32 datasets; 9 with a primary reported quantity; 73.9 GB total - this page indexes every EyeDataHub resource tagged as containing omics data. A resource can appear on more than one modality page. Primary quantities retain their source-reported units and are not summed here.

Name	Full name	Primary quantity	Size	License	Backend
dryad_uveal_melanoma_coog2	COOG2.1 Uveal Melanoma Prognostic Dataset	1,577 participants	0.0 GB	cc0	Dryad
dryad_uveitis_vitreous_biomarkers	Uveitis Vitreous Biomarker Dataset	234 eyes	0.0 GB	cc0	Dryad
dryad_dry_eye_nlrp3	Dry Eye NLRP3 Ocular Surface Dataset	150 participants	0.0 GB	cc0	Dryad
dryad_amd_zinc_complement	AMD Zinc Complement Dataset	72 participants	0.0 GB	cc0	Dryad
dryad_stargardt_wes	Stargardt Disease WES Variant Dataset	33 participants	0.0 GB	cc0	Dryad
mendeley_exome_sequencing_clec3b	Exome sequencing data for CLEC3B	9 participants	Not reported	cc-by	Mendeley Data
mendeley_proteomic_analysis_human_autoimmune_retinopathy_air	Proteomic analysis of human autoimmune retinopathy (AIR) vitreous	5 participants	Not reported	cc-by	Mendeley Data
dryad_congenital_glaucoma_wes	Identification of novel variants in LTBP2 and PXDN using whole-exome sequencing in developmental and congenital glaucoma	3 families	0.4 GB	cc0	Dryad
dryad_rpgr_cone_rod_wes	RPGR Cone-Rod Dystrophy WES Dataset	1 participants	4.5 GB	cc0	Dryad
cyp1b1_poag_genotypes	CYP1B1 Primary Open-Angle Glaucoma Genotype Dataset	Not reported	Not reported	cc-by	Figshare
mendeley_superficial_conjunctival_cells_dupilumab_treated_atopic	Superficial Conjunctival Cells from Dupilumab-treated Atopic Dermatitis Patients with Ocular Adverse Events Display a Transcriptomic Psoriasis Signature	Not reported	Not reported	cc-by	Mendeley Data
mendeley_quantified_processed_microarray_22_individuals_without	Quantified processed microarray data for 22 individuals with and without proliferative retinopathy	Not reported	Not reported	cc-by	Mendeley Data
mendeley_rop_retinopathy_prematurity_infants_serum_metabolomic	ROP (retinopathy of prematurity) infants' serum metabolomic data	Not reported	Not reported	cc-by	Mendeley Data
mendeley_raw_manuscript_light_responsive_microrna_molecules	RAW DATA to manuscript: Light-Responsive MicroRNA Molecules in Human Retinal Organoids are Differentially Regulated by Distinct Wavelengths of Light	Not reported	Not reported	cc-by	Mendeley Data
mendeley_analysis_macular_pigment_carotenoids_human_blood	Analysis of macular pigment carotenoids in human blood serum of glaucoma patients as a measure of ocular health: A Raman spectroscopic study	Not reported	Not reported	cc-by	Mendeley Data
mendeley_set_relationship_between_plasma_amino_acid	data set of Relationship between plasma amino acid and carnitine levels and primary angle closure glaucoma based on mass spectrometry metabolomics	Not reported	Not reported	cc-by	Manual (upstream-gated)
mendeley_sars_cov_2_infection_ocular_cells	SARS-CoV-2 infection of ocular cells from human adult donor eyes and hESC-derived ocular lineages, Eriksen et al	Not reported	Not reported	cc-by	Mendeley Data
mendeley_micro_go_study_transcriptional_profiling_orbital	MICRO-GO study: transcriptional profiling of orbital tissues in Graves’ orbitopathy & microbiome composition	Not reported	Not reported	cc-by	Manual (upstream-gated)
mendeley_cell_types_human_retina_its_organoids	Cell types of the human retina and its organoids at single-cell resolution. Cowan et al	Not reported	Not reported	cc-by	Mendeley Data
mendeley_plasma_energy_metabolomics_patients_ocular_disease	plasma energy metabolomics in patients with ocular disease	Not reported	Not reported	cc-by	Mendeley Data
mendeley_adjuvant_ketorolac_dexamethasone_hypoxic_human_retinal	Adjuvant Ketorolac and Dexamethasone + Hypoxic Human Retinal Pigment Epithelium (RPE) and Endothelial Cells (HREC)	Not reported	Not reported	cc-by	Mendeley Data
mendeley_serum_proteomic_profiles_keratoconus_post_laser	Serum proteomic profiles in keratoconus, post-laser vision correction ectasia, and pellucid marginal degeneration	Not reported	Not reported	cc-by	Mendeley Data
mendeley_test_results_article_motion_perception_glaucoma	Test results - Article "Motion perception and glaucoma"	Not reported	Not reported	cc-by	Mendeley Data
dryad_glaucoma_lhon_mitochondrial	Glaucoma and LHON Mitochondrial Function Dataset	Not reported	0.0 GB	cc0	Dryad
dryad_vkh_apoe	VKH APOE Transcriptomics and Proteomics Dataset	Not reported	68.9 GB	cc0	Dryad
dryad_clcc1_retinitis_pigmentosa	CLCC1 Retinitis Pigmentosa Genomics Dataset	Not reported	0.0 GB	cc0	Dryad
dryad_corneal_conjunctivitis_biomarker	Corneal Conjunctivitis Biomarker Dataset	Not reported	0.0 GB	cc0	Dryad
dryad_ocular_surface_amr	Ocular Surface AMR Keratitis Dataset	Not reported	0.0 GB	cc0	Dryad
dryad_tb_uveitis_ifn	Type 1 interferon-inducible gene expression in QuantiFERON Gold TB-positive uveitis: a tool to stratify a high versus low risk of active tuberculosis?	Not reported	0.0 GB	cc0	Dryad
dryad_rao_multiomics	Data and code from: Fatty acid metabolism reprograms immune microenvironment in retinal artery occlusion: Multi-Omics analysis highlights immunometabolic crosstalk	Not reported	0.0 GB	cc0	Dryad
dryad_acanthamoeba_keratitis_transcriptome	Human conjunctival transcriptome in Acanthamoeba keratitis: An exploratory study	Not reported	0.0 GB	cc0	Dryad
dryad_d1zd5s	Single cell transcriptomic analyses reveal the impact of bHLH factors on human retinal organoid development	Not reported	0.0 GB	cc0	Dryad